Confirmation Email

I'm having an issue with the confirmation email new users receive.The first confirmation email goes with the domain.com/vanilla link at the bottom whereas if the user hits resend the second confirmation email request pulls the correct url location at domain.com/community. I've set up the config.php in this way http://vanillaforums.org/discussion/comment/148472#Comment_148472 where the it is set up to send the domain.com/community link instead of the standard vanilla links. I am using the forum embedded into Wordpress so I need to forward all traffic there. I'm not sure what the bug is that causes it to send all the other email links correctly yet on the first confirmation email it sends the default. Any idea what is going on here?
Another post on here had the same question but was marked as answered however I don't think that it has been fixed. http://vanillaforums.org/discussion/comment/155581#Comment_155581